Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.46□□□□□ -1.37
Sox3P53784 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Gm15158-201ENSMUST00000120577 570 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Gm5125-201ENSMUST00000148614 624 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox3P53784 Gm24756-201ENSMUST00000177002 96 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Gm5272-201ENSMUST00000182730 982 ntBASIC6.46□□□□□ -1.38
Sox3P53784 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Sox3P53784 Gm28739-201ENSMUST00000185415 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28219-201ENSMUST00000185452 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28542-201ENSMUST00000185545 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28303-201ENSMUST00000185642 747 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29244-201ENSMUST00000185825 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29437-201ENSMUST00000185865 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29412-201ENSMUST00000185869 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28910-201ENSMUST00000185921 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28812-201ENSMUST00000185963 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29468-201ENSMUST00000185978 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28335-201ENSMUST00000186204 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28854-201ENSMUST00000186218 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28636-201ENSMUST00000186353 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28452-201ENSMUST00000186623 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29298-201ENSMUST00000186704 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28185-201ENSMUST00000186815 694 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28227-201ENSMUST00000186862 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28796-201ENSMUST00000186905 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29659-201ENSMUST00000187063 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28473-201ENSMUST00000187325 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28558-201ENSMUST00000187373 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28682-201ENSMUST00000187430 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28738-201ENSMUST00000187480 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28949-201ENSMUST00000187805 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28773-201ENSMUST00000187925 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29319-201ENSMUST00000188060 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29422-201ENSMUST00000188062 694 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28734-201ENSMUST00000188104 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28787-201ENSMUST00000188357 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29312-201ENSMUST00000188724 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29451-201ENSMUST00000188862 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29637-201ENSMUST00000188877 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29033-201ENSMUST00000189114 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29614-201ENSMUST00000189263 694 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28751-201ENSMUST00000189287 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29559-201ENSMUST00000189412 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28272-201ENSMUST00000189512 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28483-201ENSMUST00000189519 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28123-201ENSMUST00000189725 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28368-201ENSMUST00000189804 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29119-201ENSMUST00000189973 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28716-201ENSMUST00000190217 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29239-201ENSMUST00000190304 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28837-201ENSMUST00000190397 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28968-201ENSMUST00000190413 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28531-201ENSMUST00000190529 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm28165-201ENSMUST00000190669 694 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm29181-201ENSMUST00000191288 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm38229-201ENSMUST00000191931 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm18752-201ENSMUST00000192876 608 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm32347-201ENSMUST00000192944 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm38121-201ENSMUST00000193213 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm38035-201ENSMUST00000194427 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm38350-201ENSMUST00000194789 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm37990-201ENSMUST00000195821 696 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox3P53784 Gm18012-201ENSMUST00000204558 773 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Gm44553-201ENSMUST00000206316 2037 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox3P53784 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox3P53784 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.46□□□□□ -1.38
Sox3P53784 Gm8607-201ENSMUST00000221864 431 ntBASIC6.46□□□□□ -1.38
Sox3P53784 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.46□□□□□ -1.38
Sox3P53784 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Gm23456-201ENSMUST00000083335 137 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox3P53784 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Sox3P53784 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox3P53784 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.46□□□□□ -1.38
Sox3P53784 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox3P53784 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox3P53784 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox3P53784 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms