Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col2a1P28481 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col2a1P28481 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col2a1P28481 Gm15016-201ENSMUST00000117300 720 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm11318-201ENSMUST00000118640 961 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm12565-201ENSMUST00000119004 649 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm20620-201ENSMUST00000177528 168 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm27005-201ENSMUST00000182783 921 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Mir7235-201ENSMUST00000183796 56 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Gm37770-201ENSMUST00000192855 772 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.52□□□□□ -1.21
Col2a1P28481 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.52□□□□□ -1.21
Col2a1P28481 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.52□□□□□ -1.21
Col2a1P28481 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm9321-201ENSMUST00000221179 778 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Gm5341-201ENSMUST00000058881 489 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col2a1P28481 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col2a1P28481 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.52□□□□□ -1.21
Col2a1P28481 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col2a1P28481 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Col2a1P28481 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col2a1P28481 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col2a1P28481 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm15901-201ENSMUST00000117663 941 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Gm12307-201ENSMUST00000120581 590 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm28996-201ENSMUST00000190316 721 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Gm44809-201ENSMUST00000208305 993 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Gm38574-201ENSMUST00000211855 640 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.51□□□□□ -1.21
Col2a1P28481 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.51□□□□□ -1.21
Col2a1P28481 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col2a1P28481 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col2a1P28481 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col2a1P28481 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm11821-201ENSMUST00000117335 979 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Gm12262-201ENSMUST00000119915 305 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Gm11498-201ENSMUST00000120660 949 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Mir7020-201ENSMUST00000183787 70 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Gm8869-201ENSMUST00000195222 947 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.5□□□□□ -1.21
Col2a1P28481 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.5□□□□□ -1.21
Col2a1P28481 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.5□□□□□ -1.21
Col2a1P28481 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.5□□□□□ -1.21
Col2a1P28481 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms