Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm44265-201ENSMUST00000203631 465 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm18592-201ENSMUST00000221529 276 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col1a1P11087 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
Col1a1P11087 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.77□□□□□ -1.16
Col1a1P11087 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.77□□□□□ -1.16
Col1a1P11087 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col1a1P11087 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.77□□□□□ -1.17
Col1a1P11087 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col1a1P11087 Gm13400-201ENSMUST00000117436 380 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Gm11848-201ENSMUST00000121207 973 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Gm3544-201ENSMUST00000196129 305 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Gm17824-201ENSMUST00000197690 805 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.77□□□□□ -1.17
Col1a1P11087 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 A1cf-203ENSMUST00000224400 1204 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Col1a1P11087 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.77□□□□□ -1.17
Col1a1P11087 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Col1a1P11087 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col1a1P11087 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm11976-201ENSMUST00000119236 295 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm23071-201ENSMUST00000158242 115 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm28934-201ENSMUST00000186491 346 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 AC174797.2-203ENSMUST00000224017 716 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col1a1P11087 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.76□□□□□ -1.17
Col1a1P11087 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.76□□□□□ -1.17
Col1a1P11087 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Mir700-201ENSMUST00000102169 79 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm14237-201ENSMUST00000122080 430 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm19560-201ENSMUST00000177510 514 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms