Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
Hoxd3P09027 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm38699-201ENSMUST00000221301 1740 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm13108-201ENSMUST00000122287 1455 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm35608-201ENSMUST00000218472 2370 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm14852-201ENSMUST00000120065 647 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm14785-201ENSMUST00000120185 539 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm25837-201ENSMUST00000158919 108 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm8338-201ENSMUST00000163928 363 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm9587-201ENSMUST00000172449 454 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm22252-201ENSMUST00000179316 79 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm26977-201ENSMUST00000183151 996 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm28191-201ENSMUST00000189112 211 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm21577-201ENSMUST00000190823 697 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm37203-201ENSMUST00000191618 385 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm38050-201ENSMUST00000191904 238 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm37523-201ENSMUST00000194901 412 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm44465-201ENSMUST00000199536 114 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm43406-201ENSMUST00000200356 334 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm44018-201ENSMUST00000204471 407 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm7850-201ENSMUST00000212909 712 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm34005-201ENSMUST00000215834 282 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC166358.1-201ENSMUST00000220677 105 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC153662.2-201ENSMUST00000221097 120 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC156037.2-201ENSMUST00000221284 112 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC166341.6-201ENSMUST00000221528 105 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 CT030242.1-201ENSMUST00000221945 125 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC124772.2-201ENSMUST00000222049 154 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC153663.1-201ENSMUST00000222165 120 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 CT030157.1-201ENSMUST00000222355 148 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC150661.2-201ENSMUST00000222418 105 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 AC127242.2-201ENSMUST00000223138 148 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm24460-201ENSMUST00000082731 106 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms