Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.74□□□□□ -1.33
Cldn3Q9Z0G9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Mir674-201ENSMUST00000102421 100 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm11689-201ENSMUST00000120766 302 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm20691-201ENSMUST00000176889 333 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm8609-201ENSMUST00000182967 998 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm28846-201ENSMUST00000189161 368 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm37493-201ENSMUST00000193167 433 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm17895-201ENSMUST00000194028 874 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm37526-201ENSMUST00000194640 619 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm18012-201ENSMUST00000204558 773 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cldn3Q9Z0G9 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm13983-201ENSMUST00000118018 865 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm14870-201ENSMUST00000118414 156 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm14631-201ENSMUST00000119067 594 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm4911-201ENSMUST00000119388 945 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm5166-201ENSMUST00000121332 573 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Mir1907-201ENSMUST00000122509 90 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm28620-201ENSMUST00000190463 439 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm17918-201ENSMUST00000205315 574 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm18040-201ENSMUST00000217922 827 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
Cldn3Q9Z0G9 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms