Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm43498-201ENSMUST00000202002 1486 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm38200-201ENSMUST00000192083 2111 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm14248-201ENSMUST00000117790 544 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm15481-201ENSMUST00000120264 539 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm15586-201ENSMUST00000121218 528 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm15644-201ENSMUST00000121764 387 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm24893-201ENSMUST00000122745 369 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm22390-201ENSMUST00000157588 325 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm24773-201ENSMUST00000158513 99 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm26024-201ENSMUST00000158657 322 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm5300-201ENSMUST00000182201 1003 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm28639-201ENSMUST00000191519 481 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm37869-201ENSMUST00000193385 595 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm43812-202ENSMUST00000202701 581 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm44088-201ENSMUST00000204595 237 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm29817-201ENSMUST00000210098 172 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 AC153852.1-201ENSMUST00000217881 567 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 AC211878.5-201ENSMUST00000221697 409 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ube3bQ9ES34 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm11984-201ENSMUST00000118142 766 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm11928-201ENSMUST00000119323 437 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm12844-201ENSMUST00000119463 582 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm13525-201ENSMUST00000120607 478 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm23392-201ENSMUST00000157580 113 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm26784-201ENSMUST00000181666 410 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm28142-201ENSMUST00000186899 698 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm37225-201ENSMUST00000193423 325 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm37270-201ENSMUST00000194277 330 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm29815-201ENSMUST00000202418 178 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm45608-201ENSMUST00000210948 389 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Gm45506-201ENSMUST00000211620 280 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ube3bQ9ES34 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms