Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm11263-201ENSMUST00000121853 749 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm23392-201ENSMUST00000157580 113 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm24286-201ENSMUST00000157632 128 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Mir3473c-201ENSMUST00000175262 81 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm30517-201ENSMUST00000197350 772 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm44837-201ENSMUST00000206863 717 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm44565-201ENSMUST00000208194 269 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm10126-201ENSMUST00000221732 168 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Ddx56Q9D0R4 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm12465-201ENSMUST00000118591 300 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm15158-201ENSMUST00000120577 570 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm11349-201ENSMUST00000122209 1116 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm16248-201ENSMUST00000124238 243 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm17212-201ENSMUST00000166666 259 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm26570-201ENSMUST00000180672 342 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm17786-201ENSMUST00000182000 427 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm8192-201ENSMUST00000182196 958 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm37072-201ENSMUST00000194570 837 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm8861-201ENSMUST00000196346 832 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm44431-201ENSMUST00000203500 413 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm44137-201ENSMUST00000203670 367 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm17872-201ENSMUST00000222550 532 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm22053-201ENSMUST00000083394 200 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ddx56Q9D0R4 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.34□□□□□ -1.24
Ddx56Q9D0R4 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Ddx56Q9D0R4 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms