Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm14870-201ENSMUST00000118414 156 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm14791-201ENSMUST00000119061 1166 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm8919-201ENSMUST00000182028 1014 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm27804-201ENSMUST00000185135 119 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm43396-201ENSMUST00000197506 706 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm43928-201ENSMUST00000203737 409 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm45878-201ENSMUST00000211839 241 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 AC151902.1-201ENSMUST00000227800 375 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm2531-201ENSMUST00000075609 512 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.05□□□□□ -1.12
Brf1Q8CFK2 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Brf1Q8CFK2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm8177-201ENSMUST00000181591 1336 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm38368-201ENSMUST00000193181 1335 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm7746-201ENSMUST00000120966 503 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm14038-201ENSMUST00000121500 807 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm26023-201ENSMUST00000122722 313 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm23756-201ENSMUST00000157582 114 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Mir6348-201ENSMUST00000183804 120 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm19480-201ENSMUST00000185547 667 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm29013-201ENSMUST00000187431 237 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm37857-201ENSMUST00000191784 1199 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm18985-201ENSMUST00000196472 1079 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm43748-201ENSMUST00000202329 1233 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm44227-201ENSMUST00000203576 241 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm44213-201ENSMUST00000204977 703 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm9367-201ENSMUST00000205703 546 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms