Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm14869-201ENSMUST00000119007 884 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm9439-201ENSMUST00000119554 973 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm13221-201ENSMUST00000121712 430 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm26023-201ENSMUST00000122722 313 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm24286-201ENSMUST00000157632 128 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm21839-201ENSMUST00000179536 378 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm26528-201ENSMUST00000181965 283 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm3511-201ENSMUST00000199823 204 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm44225-201ENSMUST00000203582 186 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm18559-201ENSMUST00000208249 604 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm5341-201ENSMUST00000058881 489 ntBASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Lrif1Q8CDD9 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm12654-201ENSMUST00000120387 587 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm6434-201ENSMUST00000163316 372 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm29383-201ENSMUST00000188284 480 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm9604-201ENSMUST00000211175 433 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lrif1Q8CDD9 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lrif1Q8CDD9 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lrif1Q8CDD9 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms