Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC164437.1-201ENSMUST00000227321 2308 ntBASIC9.49□□□□□ -0.89
Trim35Q8C006 Gm45205-201ENSMUST00000205745 3330 ntBASIC9.49□□□□□ -0.89
Trim35Q8C006 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trim35Q8C006 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim35Q8C006 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim35Q8C006 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trim35Q8C006 AC151903.1-201ENSMUST00000226677 1423 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Dgcr2-202ENSMUST00000066127 3790 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm26521-201ENSMUST00000181576 2215 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Ces1b-201ENSMUST00000109582 1964 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Nanog-203ENSMUST00000112581 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm28321-201ENSMUST00000187677 2327 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Olfr531-201ENSMUST00000080153 2320 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Abcd3-204ENSMUST00000197383 3156 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Slc9a8-203ENSMUST00000109218 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Zfp42-203ENSMUST00000211248 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm14537-201ENSMUST00000117464 599 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm15702-201ENSMUST00000119680 444 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm7991-201ENSMUST00000168668 591 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm21827-201ENSMUST00000178247 423 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm28680-201ENSMUST00000186743 480 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm42855-201ENSMUST00000197388 253 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm43656-201ENSMUST00000197882 434 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm44979-201ENSMUST00000206218 287 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC9.48□□□□□ -0.89
Trim35Q8C006 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm18391-201ENSMUST00000217189 658 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 AC121966.1-201ENSMUST00000221458 282 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 CT571268.1-201ENSMUST00000222320 407 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 CT030664.1-201ENSMUST00000223639 908 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm22265-201ENSMUST00000082947 116 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Il18bp-203ENSMUST00000209844 1594 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm37783-201ENSMUST00000192025 1856 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm20705-201ENSMUST00000177278 1921 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Auts2-217ENSMUST00000187544 3166 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Grk2-201ENSMUST00000025791 3182 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm17743-201ENSMUST00000198545 1675 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 AC147250.1-201ENSMUST00000224781 1364 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Gm37970-201ENSMUST00000193865 1732 ntBASIC9.48□□□□□ -0.89
Trim35Q8C006 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim35Q8C006 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Krtap16-1-201ENSMUST00000105050 1888 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 AC165260.6-205ENSMUST00000224190 9762 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 C2cd5-207ENSMUST00000203673 3332 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm8326-201ENSMUST00000188705 1953 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm22834-201ENSMUST00000102021 79 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Mir450-2-201ENSMUST00000102444 69 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm9126-201ENSMUST00000117072 416 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm13170-201ENSMUST00000119716 643 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm14111-201ENSMUST00000119851 999 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm6305-201ENSMUST00000121027 1012 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm8606-201ENSMUST00000121482 888 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms