Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 AC154642.1-201ENSMUST00000224173 740 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm26442-201ENSMUST00000082588 153 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Mir3068-201ENSMUST00000083004 136 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm42653-201ENSMUST00000200644 2839 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 AC158988.1-201ENSMUST00000226731 2624 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm28667-201ENSMUST00000189873 2171 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm24709-201ENSMUST00000104123 132 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm15765-201ENSMUST00000118407 910 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm14038-201ENSMUST00000121500 807 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm13642-201ENSMUST00000121697 381 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm23430-201ENSMUST00000122490 314 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm5125-201ENSMUST00000148614 624 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm10410-201ENSMUST00000180138 384 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm26898-201ENSMUST00000181678 384 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm27348-201ENSMUST00000184511 170 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm18447-201ENSMUST00000187501 307 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm37809-201ENSMUST00000195050 931 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm43124-201ENSMUST00000201878 278 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm19340-201ENSMUST00000221995 345 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Gm37772-201ENSMUST00000191635 1394 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 AC155710.1-201ENSMUST00000219913 1353 ntBASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp40Q8BWR4 CT010514.1-201ENSMUST00000214088 2969 ntBASIC9.21□□□□□ -0.93
Usp40Q8BWR4 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Usp40Q8BWR4 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Usp40Q8BWR4 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Usp40Q8BWR4 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Usp40Q8BWR4 Mir1192-201ENSMUST00000116976 121 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm15621-201ENSMUST00000119162 364 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm15225-201ENSMUST00000120449 1017 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm26357-201ENSMUST00000158218 115 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm23386-201ENSMUST00000158585 144 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm9658-201ENSMUST00000182757 1012 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm29197-201ENSMUST00000185922 702 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm18799-201ENSMUST00000189104 913 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm37135-201ENSMUST00000192652 534 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm18717-201ENSMUST00000192744 1241 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm5694-201ENSMUST00000195648 641 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm44265-201ENSMUST00000203631 465 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm18838-201ENSMUST00000204855 886 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 AC153544.1-201ENSMUST00000217988 400 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 AC131029.2-201ENSMUST00000226696 628 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm37289-201ENSMUST00000195409 1402 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 AC158595.1-201ENSMUST00000217989 1435 ntBASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms