Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col16a1Q8BLX7 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm19560-201ENSMUST00000177510 514 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm27970-201ENSMUST00000184854 407 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm44768-201ENSMUST00000205719 393 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Mir298-201ENSMUST00000083476 82 ntBASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col16a1Q8BLX7 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm11624-201ENSMUST00000118579 1041 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm15781-201ENSMUST00000120216 323 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm7931-201ENSMUST00000121537 271 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm18290-201ENSMUST00000202900 844 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col16a1Q8BLX7 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm8534-201ENSMUST00000118553 766 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm23031-201ENSMUST00000157998 119 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm27219-201ENSMUST00000184633 742 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Gm9710-201ENSMUST00000198053 499 ntBASIC8.65□□□□□ -1.03
Col16a1Q8BLX7 Mir6906-201ENSMUST00000198998 58 ntBASIC8.65□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms