Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm13835-201ENSMUST00000118459 685 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm13626-201ENSMUST00000119435 402 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm14805-201ENSMUST00000120172 340 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm12181-201ENSMUST00000121448 531 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm25342-201ENSMUST00000157459 122 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm26346-201ENSMUST00000157525 329 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm19840-201ENSMUST00000169624 882 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm6055-201ENSMUST00000180532 378 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm37770-201ENSMUST00000192855 772 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup98Q6PFD9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm14173-201ENSMUST00000117690 278 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm12937-201ENSMUST00000118333 448 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm22094-201ENSMUST00000158976 117 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm28665-201ENSMUST00000189269 670 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Olfr467-201ENSMUST00000084756 927 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.74□□□□□ -1.17
Nup98Q6PFD9 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Nup98Q6PFD9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20778-201ENSMUST00000178524 627 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Mir6911-201ENSMUST00000184241 69 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm21728-201ENSMUST00000188442 695 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm21889-201ENSMUST00000188487 695 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20932-201ENSMUST00000189115 694 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm21920-201ENSMUST00000190042 695 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms