Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Scn2bQ56A07 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.55□□□□□ -1.36
Scn2bQ56A07 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.55□□□□□ -1.36
Scn2bQ56A07 AU020206-202ENSMUST00000206358 3009 ntBASIC6.55□□□□□ -1.36
Scn2bQ56A07 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.55□□□□□ -1.36
Scn2bQ56A07 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn2bQ56A07 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm24519-201ENSMUST00000104507 132 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm6142-201ENSMUST00000120290 325 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm14070-201ENSMUST00000120773 428 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm20691-201ENSMUST00000176889 333 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Mir8105-201ENSMUST00000184718 89 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm34144-201ENSMUST00000197039 259 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm42782-201ENSMUST00000197286 522 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm17918-201ENSMUST00000205315 574 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm9357-201ENSMUST00000207138 805 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm4585-201ENSMUST00000207218 452 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm2975-201ENSMUST00000209710 820 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 AW822073-201ENSMUST00000075305 555 ntBASIC6.54□□□□□ -1.36
Scn2bQ56A07 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn2bQ56A07 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.53□□□□□ -1.36
Scn2bQ56A07 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.53□□□□□ -1.36
Scn2bQ56A07 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.53□□□□□ -1.36
Scn2bQ56A07 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn2bQ56A07 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms