Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm37420-201ENSMUST00000195332 2912 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm24069-201ENSMUST00000104512 127 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm11462-201ENSMUST00000117749 562 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm14893-201ENSMUST00000117904 282 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm15750-201ENSMUST00000120970 616 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm25117-201ENSMUST00000157194 144 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm3140-201ENSMUST00000163523 481 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm5456-201ENSMUST00000170706 844 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm17045-201ENSMUST00000178600 844 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm27295-201ENSMUST00000184264 153 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm29509-201ENSMUST00000185716 321 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm5260-201ENSMUST00000186157 949 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm2229-201ENSMUST00000193328 710 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm38237-201ENSMUST00000193366 376 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm32983-201ENSMUST00000208500 505 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm7769-201ENSMUST00000212900 933 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm4556-201ENSMUST00000217808 355 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm6990-201ENSMUST00000086830 348 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Mir484-201ENSMUST00000093566 67 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gm37548-201ENSMUST00000194519 3814 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.85□□□□□ -1.47
Nkx3-1P97436 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nkx3-1P97436 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC122356.1-202ENSMUST00000227328 2758 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm16123-201ENSMUST00000118647 1517 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms