Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm18637-201ENSMUST00000217665 1900 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.63□□□□□ -1.19
Sox1P53783 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.63□□□□□ -1.19
Sox1P53783 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm43219-201ENSMUST00000197972 1937 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm22267-201ENSMUST00000104008 131 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm23979-201ENSMUST00000104071 128 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Snord65-201ENSMUST00000104269 72 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm16179-201ENSMUST00000120685 373 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.63□□□□□ -1.19
Sox1P53783 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm2735-201ENSMUST00000136133 277 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm23896-201ENSMUST00000158109 130 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm24393-201ENSMUST00000158135 97 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm24002-201ENSMUST00000158456 104 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm20401-201ENSMUST00000173717 212 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm9285-201ENSMUST00000177691 697 ntBASIC7.63□□□□□ -1.19
Sox1P53783 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm7867-201ENSMUST00000189856 546 ntBASIC7.63□□□□□ -1.19
Sox1P53783 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.63□□□□□ -1.19
Sox1P53783 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm44411-201ENSMUST00000204172 349 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm19182-201ENSMUST00000207139 577 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm2975-201ENSMUST00000209710 820 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 AC107663.3-201ENSMUST00000225873 601 ntBASIC7.63□□□□□ -1.19
Sox1P53783 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Sox1P53783 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Gm25586-201ENSMUST00000082499 112 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox1P53783 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox1P53783 Gm38029-201ENSMUST00000192669 2090 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Gm42546-201ENSMUST00000201584 2592 ntBASIC7.63□□□□□ -1.19
Sox1P53783 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Sox1P53783 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Sox1P53783 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Sox1P53783 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm37633-201ENSMUST00000192858 2700 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
Sox1P53783 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm25311-201ENSMUST00000104136 132 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Sox1P53783 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm5319-201ENSMUST00000118965 873 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm13252-201ENSMUST00000119355 321 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm11910-201ENSMUST00000121624 432 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms