Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.78□□□□□ -1.32
HttP42859 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.78□□□□□ -1.32
HttP42859 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
HttP42859 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
HttP42859 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.77□□□□□ -1.33
HttP42859 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gm14870-201ENSMUST00000118414 156 ntBASIC6.77□□□□□ -1.33
HttP42859 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Gm45660-201ENSMUST00000210267 151 ntBASIC6.77□□□□□ -1.33
HttP42859 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.77□□□□□ -1.33
HttP42859 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HttP42859 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.77□□□□□ -1.33
HttP42859 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.77□□□□□ -1.33
HttP42859 Gm12754-201ENSMUST00000121908 454 ntBASIC6.77□□□□□ -1.33
HttP42859 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.77□□□□□ -1.33
HttP42859 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.77□□□□□ -1.33
HttP42859 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HttP42859 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.77□□□□□ -1.33
HttP42859 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gm42522-201ENSMUST00000196071 255 ntBASIC6.77□□□□□ -1.33
HttP42859 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.77□□□□□ -1.33
HttP42859 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
HttP42859 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HttP42859 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HttP42859 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Kif1b-202ENSMUST00000055647 5992 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HttP42859 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gm13531-201ENSMUST00000121893 543 ntBASIC6.76□□□□□ -1.33
HttP42859 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.76□□□□□ -1.33
HttP42859 CT009713.5-201ENSMUST00000224508 909 ntBASIC6.76□□□□□ -1.33
HttP42859 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.76□□□□□ -1.33
HttP42859 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HttP42859 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HttP42859 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HttP42859 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
HttP42859 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
HttP42859 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
HttP42859 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HttP42859 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HttP42859 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HttP42859 Gm8595-201ENSMUST00000118250 630 ntBASIC6.76□□□□□ -1.33
HttP42859 Gm12303-201ENSMUST00000119506 673 ntBASIC6.76□□□□□ -1.33
HttP42859 Gm13077-201ENSMUST00000121941 484 ntBASIC6.76□□□□□ -1.33
HttP42859 Gm24860-201ENSMUST00000158457 276 ntBASIC6.76□□□□□ -1.33
HttP42859 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.76□□□□□ -1.33
HttP42859 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.76□□□□□ -1.33
HttP42859 Gm37493-201ENSMUST00000193167 433 ntBASIC6.76□□□□□ -1.33
HttP42859 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.76□□□□□ -1.33
HttP42859 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
HttP42859 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gm14106-201ENSMUST00000119382 438 ntBASIC6.76□□□□□ -1.33
HttP42859 Gm13207-201ENSMUST00000119862 773 ntBASIC6.76□□□□□ -1.33
HttP42859 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
HttP42859 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms