Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.24□□□□□ -1.41
Sox6P40645 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Mir760-201ENSMUST00000103257 119 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm25916-201ENSMUST00000104263 131 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm26417-201ENSMUST00000104274 135 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm24286-201ENSMUST00000157632 128 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm2976-201ENSMUST00000160362 513 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm3760-201ENSMUST00000167475 804 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Gm25640-201ENSMUST00000175378 125 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm24756-201ENSMUST00000177002 96 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Gm8182-201ENSMUST00000197863 769 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm4525-201ENSMUST00000198831 254 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm44112-201ENSMUST00000204787 372 ntBASIC6.24□□□□□ -1.41
Sox6P40645 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.24□□□□□ -1.41
Sox6P40645 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox6P40645 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox6P40645 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox6P40645 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.24□□□□□ -1.41
Sox6P40645 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox6P40645 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox6P40645 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox6P40645 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox6P40645 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Sox6P40645 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Sox6P40645 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox6P40645 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox6P40645 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Gm11581-201ENSMUST00000122024 763 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Gm16284-201ENSMUST00000140995 400 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Mir1929-201ENSMUST00000158635 93 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm27866-201ENSMUST00000184459 171 ntBASIC6.23□□□□□ -1.41
Sox6P40645 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.23□□□□□ -1.41
Sox6P40645 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Gm3841-201ENSMUST00000191399 451 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Gm44984-201ENSMUST00000207802 394 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Gm18907-201ENSMUST00000209719 932 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.23□□□□□ -1.41
Sox6P40645 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm2398-201ENSMUST00000218347 883 ntBASIC6.23□□□□□ -1.41
Sox6P40645 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.23□□□□□ -1.41
Sox6P40645 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.23□□□□□ -1.41
Sox6P40645 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox6P40645 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox6P40645 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.23□□□□□ -1.41
Sox6P40645 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox6P40645 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox6P40645 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.23□□□□□ -1.41
Sox6P40645 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox6P40645 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms