Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
Usp4P35123 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.34□□□□□ -1.23
Usp4P35123 Gm29008-201ENSMUST00000189387 298 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm28164-201ENSMUST00000190143 442 ntBASIC7.34□□□□□ -1.23
Usp4P35123 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm8168-201ENSMUST00000209631 948 ntBASIC7.34□□□□□ -1.23
Usp4P35123 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.34□□□□□ -1.23
Usp4P35123 AC121986.1-201ENSMUST00000218588 781 ntBASIC7.34□□□□□ -1.23
Usp4P35123 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.34□□□□□ -1.23
Usp4P35123 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 AC159242.1-201ENSMUST00000225832 194 ntBASIC7.34□□□□□ -1.23
Usp4P35123 AC133517.2-201ENSMUST00000226820 690 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Gm5471-201ENSMUST00000072732 337 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp4P35123 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.34□□□□□ -1.23
Usp4P35123 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.34□□□□□ -1.24
Usp4P35123 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.34□□□□□ -1.24
Usp4P35123 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp4P35123 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Usp4P35123 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Usp4P35123 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Gm12331-201ENSMUST00000119927 622 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Gm15188-201ENSMUST00000121264 704 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Gm24893-201ENSMUST00000122745 369 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.33□□□□□ -1.24
Usp4P35123 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.33□□□□□ -1.24
Usp4P35123 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.33□□□□□ -1.24
Usp4P35123 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.33□□□□□ -1.24
Usp4P35123 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm27001-201ENSMUST00000182252 936 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Gm27596-201ENSMUST00000185061 83 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Gm27458-201ENSMUST00000185108 121 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp4P35123 Gm28416-201ENSMUST00000188334 292 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.33□□□□□ -1.24
Usp4P35123 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm9038-201ENSMUST00000203400 604 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Gm46191-201ENSMUST00000218899 433 ntBASIC7.33□□□□□ -1.24
Usp4P35123 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.33□□□□□ -1.24
Usp4P35123 AC163664.1-201ENSMUST00000226251 1248 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp4P35123 Mir455-201ENSMUST00000093594 82 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp4P35123 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.33□□□□□ -1.24
Usp4P35123 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp4P35123 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp4P35123 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Usp4P35123 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
Usp4P35123 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms