Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm13137-201ENSMUST00000118035 345 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm26162-201ENSMUST00000157793 132 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm22655-201ENSMUST00000174949 96 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm2926-201ENSMUST00000205625 239 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm2225-201ENSMUST00000209570 377 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm7499-201ENSMUST00000210423 813 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm24709-201ENSMUST00000104123 132 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm12442-201ENSMUST00000118372 338 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm15096-201ENSMUST00000121918 878 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm15300-201ENSMUST00000122324 279 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scn3aA2ASI5 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm27970-201ENSMUST00000184854 407 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm8506-201ENSMUST00000186661 829 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm43392-201ENSMUST00000196560 434 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm18839-201ENSMUST00000204292 670 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Gm18259-201ENSMUST00000220991 2010 ntBASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scn3aA2ASI5 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms