Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm24519-201ENSMUST00000104507 132 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 BC064078-201ENSMUST00000122939 570 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm4956-202ENSMUST00000178869 672 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm27360-201ENSMUST00000183487 80 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm24451-201ENSMUST00000083353 133 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.34□□□□□ -1.4
Trim3Q9R1R2 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm14729-201ENSMUST00000118373 689 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm13930-201ENSMUST00000118569 368 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm14466-201ENSMUST00000119028 451 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm23757-201ENSMUST00000158353 100 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29048-201ENSMUST00000185342 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29403-201ENSMUST00000185491 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28234-201ENSMUST00000185657 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28248-201ENSMUST00000186093 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29633-202ENSMUST00000186217 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28829-201ENSMUST00000186231 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28261-201ENSMUST00000186417 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28815-201ENSMUST00000186751 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28608-201ENSMUST00000186860 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28122-201ENSMUST00000187088 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28420-201ENSMUST00000187340 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28106-201ENSMUST00000187640 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28698-201ENSMUST00000187734 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29224-201ENSMUST00000187965 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29189-201ENSMUST00000188018 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29476-201ENSMUST00000188397 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29505-201ENSMUST00000188424 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28125-201ENSMUST00000188470 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29391-201ENSMUST00000188545 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29280-201ENSMUST00000188571 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28349-201ENSMUST00000188590 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29652-201ENSMUST00000188622 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28819-206ENSMUST00000188816 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29079-201ENSMUST00000188875 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28213-201ENSMUST00000189183 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29382-201ENSMUST00000189549 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29377-205ENSMUST00000189603 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28327-201ENSMUST00000189638 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28790-201ENSMUST00000189642 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28907-201ENSMUST00000189700 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29586-207ENSMUST00000189745 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29115-201ENSMUST00000189870 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28366-201ENSMUST00000190147 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29212-201ENSMUST00000190384 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29533-201ENSMUST00000190403 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28162-201ENSMUST00000190545 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29030-201ENSMUST00000190848 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28742-201ENSMUST00000191001 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28899-201ENSMUST00000191161 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29567-201ENSMUST00000191188 615 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms