Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.28□□□□□ -1.4
Use1Q9CQ56 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.28□□□□□ -1.4
Use1Q9CQ56 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.28□□□□□ -1.4
Use1Q9CQ56 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Use1Q9CQ56 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm6067-201ENSMUST00000121648 491 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm15242-201ENSMUST00000122459 283 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm22035-201ENSMUST00000157284 228 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm25574-201ENSMUST00000175245 249 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm27178-201ENSMUST00000184962 340 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm17918-201ENSMUST00000205315 574 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm46203-201ENSMUST00000218130 478 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm3678-201ENSMUST00000218888 492 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm19011-201ENSMUST00000221777 808 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.27□□□□□ -1.41
Use1Q9CQ56 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.27□□□□□ -1.41
Use1Q9CQ56 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm26079-201ENSMUST00000104066 133 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm26419-201ENSMUST00000104272 133 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm14865-201ENSMUST00000117523 494 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm26182-201ENSMUST00000157688 116 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm7651-201ENSMUST00000173398 901 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm27152-201ENSMUST00000183828 99 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm43689-201ENSMUST00000195951 427 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm23238-201ENSMUST00000083007 164 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms