Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhga4Q91XY4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm22438-201ENSMUST00000104049 132 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm25311-201ENSMUST00000104136 132 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm5754-201ENSMUST00000118774 892 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm15403-201ENSMUST00000119343 1227 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm12903-201ENSMUST00000121015 544 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm22275-201ENSMUST00000122470 310 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Mir3078-201ENSMUST00000175231 87 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm38330-201ENSMUST00000192743 959 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm37871-201ENSMUST00000194973 688 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm43491-201ENSMUST00000197133 784 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm46311-201ENSMUST00000217971 203 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 AV026068-219ENSMUST00000224148 933 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 AV026068-220ENSMUST00000224153 1147 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 AV026068-224ENSMUST00000224827 928 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.95□□□□□ -1.3
Pcdhga4Q91XY4 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.94□□□□□ -1.3
Pcdhga4Q91XY4 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms