Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm26417-201ENSMUST00000104274 135 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm15786-201ENSMUST00000121079 450 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm12181-201ENSMUST00000121448 531 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm11263-201ENSMUST00000121853 749 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm11581-201ENSMUST00000122024 763 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm17022-201ENSMUST00000166415 922 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm7651-201ENSMUST00000173398 901 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm5305-201ENSMUST00000204010 746 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm25189-201ENSMUST00000083911 164 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm7731-201ENSMUST00000091759 470 ntBASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc40Q8BI79 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm9836-201ENSMUST00000117132 216 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm13930-201ENSMUST00000118569 368 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm14587-201ENSMUST00000121714 658 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm6061-201ENSMUST00000175860 492 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm24756-201ENSMUST00000177002 96 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm23018-201ENSMUST00000177928 109 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm28580-201ENSMUST00000186767 88 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm29759-201ENSMUST00000205860 327 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Mir455-201ENSMUST00000093594 82 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.04□□□□□ -1.28
Ccdc40Q8BI79 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Mir688-201ENSMUST00000102055 75 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms