Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clcn1Q64347 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clcn1Q64347 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clcn1Q64347 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clcn1Q64347 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC9.78□□□□□ -0.84
Clcn1Q64347 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clcn1Q64347 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Clcn1Q64347 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Clcn1Q64347 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Clcn1Q64347 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Clcn1Q64347 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm13614-201ENSMUST00000117306 503 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm13414-201ENSMUST00000117516 727 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm11606-201ENSMUST00000120706 617 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm6373-201ENSMUST00000121026 360 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm24635-201ENSMUST00000122712 128 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm23467-201ENSMUST00000157127 159 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm25164-201ENSMUST00000158908 116 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm5473-201ENSMUST00000179326 642 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC9.77□□□□□ -0.85
Clcn1Q64347 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm42983-201ENSMUST00000199879 815 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm43558-201ENSMUST00000200155 210 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm19764-201ENSMUST00000203630 649 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 AC131117.2-202ENSMUST00000224539 547 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 AC154747.4-201ENSMUST00000224802 903 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 AC154329.2-201ENSMUST00000225257 383 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm26264-201ENSMUST00000083278 159 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Mir455-201ENSMUST00000093594 82 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm37457-201ENSMUST00000193639 2433 ntBASIC9.77□□□□□ -0.85
Clcn1Q64347 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clcn1Q64347 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.77□□□□□ -0.85
Clcn1Q64347 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Mir467g-201ENSMUST00000116906 120 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm14007-201ENSMUST00000118288 210 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm13532-201ENSMUST00000120373 240 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm25432-201ENSMUST00000158284 66 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm18501-201ENSMUST00000185363 664 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm29641-201ENSMUST00000188955 259 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm37152-201ENSMUST00000193369 1175 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm5554-201ENSMUST00000199726 1206 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm2622-201ENSMUST00000200018 471 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm20997-201ENSMUST00000205148 231 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm8209-201ENSMUST00000206386 553 ntBASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC9.76□□□□□ -0.85
Clcn1Q64347 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clcn1Q64347 Gm46317-201ENSMUST00000221103 393 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms