Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Smarcc1P97496 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Smarcc1P97496 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Smarcc1P97496 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm11879-201ENSMUST00000121885 702 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm25782-201ENSMUST00000122526 289 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm22094-201ENSMUST00000158976 117 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm25675-201ENSMUST00000174979 118 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm24111-201ENSMUST00000175491 97 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm19035-202ENSMUST00000194575 959 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Gm21089-201ENSMUST00000215843 325 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.65□□□□□ -1.02
Smarcc1P97496 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Olfr687-201ENSMUST00000098154 938 ntBASIC8.65□□□□□ -1.02
Smarcc1P97496 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Smarcc1P97496 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Smarcc1P97496 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.65□□□□□ -1.03
Smarcc1P97496 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
Smarcc1P97496 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Smarcc1P97496 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Smarcc1P97496 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Smarcc1P97496 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Smarcc1P97496 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Smarcc1P97496 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Smarcc1P97496 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Smarcc1P97496 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Smarcc1P97496 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm12073-201ENSMUST00000117382 524 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm14695-201ENSMUST00000121721 282 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm12438-201ENSMUST00000122034 336 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm24687-201ENSMUST00000157758 241 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm25387-201ENSMUST00000157813 132 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm26169-201ENSMUST00000158420 135 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm26557-201ENSMUST00000180756 493 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm8581-201ENSMUST00000188636 890 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC8.64□□□□□ -1.03
Smarcc1P97496 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms