Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Xcl1P47993 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Xcl1P47993 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Xcl1P47993 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC4.12□□□□□ -1.75
Xcl1P47993 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Xcl1P47993 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Xcl1P47993 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.12□□□□□ -1.75
Xcl1P47993 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Xcl1P47993 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Xcl1P47993 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm37880-201ENSMUST00000192216 3257 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm25564-201ENSMUST00000104604 132 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm11864-201ENSMUST00000116179 1220 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm11207-201ENSMUST00000117824 414 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm15129-201ENSMUST00000119673 279 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm13991-201ENSMUST00000120190 648 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm14563-201ENSMUST00000120571 354 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm8682-201ENSMUST00000121310 498 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm14612-201ENSMUST00000121522 881 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC4.11□□□□□ -1.75
Xcl1P47993 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm22094-201ENSMUST00000158976 117 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm23563-201ENSMUST00000174900 251 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm9167-201ENSMUST00000182469 962 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Mir6354-201ENSMUST00000184979 116 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm8307-201ENSMUST00000187682 1150 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm28801-201ENSMUST00000188761 449 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm29592-201ENSMUST00000189434 370 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm3142-201ENSMUST00000190107 414 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm37103-201ENSMUST00000191830 115 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm17978-201ENSMUST00000195986 769 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm43656-201ENSMUST00000197882 434 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm23927-202ENSMUST00000199928 216 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm43690-201ENSMUST00000201213 266 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm45509-201ENSMUST00000209624 1229 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC4.11□□□□□ -1.75
Xcl1P47993 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm5791-201ENSMUST00000220840 489 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 AC156016.5-201ENSMUST00000228742 355 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm23927-201ENSMUST00000082466 215 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Mir3068-201ENSMUST00000083004 136 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Gm23458-201ENSMUST00000083257 169 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Xcl1P47993 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm32072-201ENSMUST00000200803 1434 ntBASIC4.11□□□□□ -1.75
Xcl1P47993 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Xcl1P47993 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 239 ms