Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm25487-201ENSMUST00000158725 125 ntBASIC6.79□□□□□ -1.32
HttP42859 Gm8358-201ENSMUST00000167222 555 ntBASIC6.79□□□□□ -1.32
HttP42859 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.79□□□□□ -1.32
HttP42859 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.79□□□□□ -1.32
HttP42859 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.79□□□□□ -1.32
HttP42859 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.79□□□□□ -1.32
HttP42859 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Gm24041-201ENSMUST00000083115 156 ntBASIC6.79□□□□□ -1.32
HttP42859 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HttP42859 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HttP42859 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
HttP42859 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HttP42859 Gm12077-201ENSMUST00000117049 364 ntBASIC6.79□□□□□ -1.32
HttP42859 Gm8545-201ENSMUST00000120692 801 ntBASIC6.79□□□□□ -1.32
HttP42859 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.79□□□□□ -1.32
HttP42859 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.79□□□□□ -1.32
HttP42859 Gm6474-201ENSMUST00000223250 699 ntBASIC6.79□□□□□ -1.32
HttP42859 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.78□□□□□ -1.32
HttP42859 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.78□□□□□ -1.32
HttP42859 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
HttP42859 Gm22726-201ENSMUST00000158089 179 ntBASIC6.78□□□□□ -1.32
HttP42859 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HttP42859 Gm37770-201ENSMUST00000192855 772 ntBASIC6.78□□□□□ -1.32
HttP42859 Gm38015-201ENSMUST00000193048 188 ntBASIC6.78□□□□□ -1.32
HttP42859 Gm43467-201ENSMUST00000197441 437 ntBASIC6.78□□□□□ -1.32
HttP42859 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.78□□□□□ -1.32
HttP42859 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm25187-201ENSMUST00000083906 133 ntBASIC6.78□□□□□ -1.32
HttP42859 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
HttP42859 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.78□□□□□ -1.32
HttP42859 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.78□□□□□ -1.32
HttP42859 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HttP42859 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HttP42859 Gm18444-201ENSMUST00000191239 629 ntBASIC6.78□□□□□ -1.32
HttP42859 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.78□□□□□ -1.32
HttP42859 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.78□□□□□ -1.32
HttP42859 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms