Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC9.91□□□□□ -0.82
Chd1P40201 Mir6362-201ENSMUST00000184329 107 ntBASIC9.91□□□□□ -0.82
Chd1P40201 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC9.91□□□□□ -0.82
Chd1P40201 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Trio-210ENSMUST00000227337 6375 ntBASIC9.91□□□□□ -0.82
Chd1P40201 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Chd1P40201 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Chd1P40201 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Chd1P40201 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Gm14373-201ENSMUST00000122467 2158 ntBASIC9.91□□□□□ -0.82
Chd1P40201 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Chd1P40201 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Wnk1-218ENSMUST00000161512 1426 ntBASIC9.91□□□□□ -0.82
Chd1P40201 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Gm23071-201ENSMUST00000158242 115 ntBASIC9.9□□□□□ -0.82
Chd1P40201 Gm1972-201ENSMUST00000181606 964 ntBASIC9.9□□□□□ -0.82
Chd1P40201 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.9□□□□□ -0.82
Chd1P40201 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Chd1P40201 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Chd1P40201 Gm37274-201ENSMUST00000192167 1682 ntBASIC9.9□□□□□ -0.82
Chd1P40201 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chd1P40201 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Chd1P40201 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chd1P40201 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd1P40201 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chd1P40201 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chd1P40201 Gm37906-201ENSMUST00000192050 3035 ntBASIC9.9□□□□□ -0.83
Chd1P40201 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Chd1P40201 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Chd1P40201 Gm3053-201ENSMUST00000161709 616 ntBASIC9.9□□□□□ -0.83
Chd1P40201 Gm18728-201ENSMUST00000186155 753 ntBASIC9.9□□□□□ -0.83
Chd1P40201 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Chd1P40201 Gm44382-201ENSMUST00000198683 122 ntBASIC9.9□□□□□ -0.83
Chd1P40201 AC102287.1-201ENSMUST00000211412 454 ntBASIC9.9□□□□□ -0.83
Chd1P40201 Gm8613-201ENSMUST00000220383 1077 ntBASIC9.9□□□□□ -0.83
Chd1P40201 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Chd1P40201 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Chd1P40201 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC9.9□□□□□ -0.83
Chd1P40201 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Chd1P40201 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chd1P40201 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Gm42577-201ENSMUST00000201367 3211 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC9.89□□□□□ -0.83
Chd1P40201 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.89□□□□□ -0.83
Chd1P40201 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Chd1P40201 Gm14870-201ENSMUST00000118414 156 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC9.89□□□□□ -0.83
Chd1P40201 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC9.89□□□□□ -0.83
Chd1P40201 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Gm24741-201ENSMUST00000158857 106 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Gm37024-201ENSMUST00000192224 868 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Gm7838-201ENSMUST00000203221 1189 ntBASIC9.89□□□□□ -0.83
Chd1P40201 AC153937.1-201ENSMUST00000218734 412 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Mir188-201ENSMUST00000083464 68 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.89□□□□□ -0.83
Chd1P40201 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Chd1P40201 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd1P40201 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Gm15766-201ENSMUST00000118025 813 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Gm22895-201ENSMUST00000157508 308 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Gm24731-201ENSMUST00000158227 131 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Chd1P40201 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Gm43631-201ENSMUST00000202011 369 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Gm17918-201ENSMUST00000205315 574 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms