Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Usp4P35123 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.36□□□□□ -1.23
Usp4P35123 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp4P35123 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.35□□□□□ -1.23
Usp4P35123 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Usp4P35123 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Gm24142-201ENSMUST00000101960 107 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm15203-201ENSMUST00000117668 455 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm14836-201ENSMUST00000118567 471 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm13521-201ENSMUST00000118922 866 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm5759-201ENSMUST00000119203 811 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm11278-201ENSMUST00000121002 997 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm11726-201ENSMUST00000121028 424 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm2709-201ENSMUST00000142979 350 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm25180-201ENSMUST00000157746 115 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm23762-201ENSMUST00000158348 106 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp4P35123 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.35□□□□□ -1.23
Usp4P35123 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Gm9419-201ENSMUST00000200672 567 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.35□□□□□ -1.23
Usp4P35123 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm43905-201ENSMUST00000204516 204 ntBASIC7.35□□□□□ -1.23
Usp4P35123 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC7.35□□□□□ -1.23
Usp4P35123 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.35□□□□□ -1.23
Usp4P35123 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 AC165437.1-201ENSMUST00000228640 536 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp4P35123 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Usp4P35123 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp4P35123 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Gm7416-201ENSMUST00000117448 1487 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.35□□□□□ -1.23
Usp4P35123 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp4P35123 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp4P35123 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp4P35123 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp4P35123 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp4P35123 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Gm13590-201ENSMUST00000120183 1588 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp4P35123 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp4P35123 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp4P35123 Gm25614-201ENSMUST00000104013 133 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm25631-201ENSMUST00000104390 130 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm13739-201ENSMUST00000118020 530 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm11865-201ENSMUST00000118093 859 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm11877-201ENSMUST00000118921 852 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm11928-201ENSMUST00000119323 437 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm11483-201ENSMUST00000119839 247 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm15362-201ENSMUST00000121459 388 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm12630-201ENSMUST00000121575 784 ntBASIC7.34□□□□□ -1.23
Usp4P35123 Gm2735-201ENSMUST00000136133 277 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms