Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm26289-201ENSMUST00000104169 131 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Gm12244-201ENSMUST00000119500 291 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Gm15096-201ENSMUST00000121918 878 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm24435-201ENSMUST00000157886 110 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Gm26169-201ENSMUST00000158420 135 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm28665-201ENSMUST00000189269 670 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Col2a1P28481 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm37376-201ENSMUST00000192176 453 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.56□□□□□ -1.2
Col2a1P28481 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm6990-201ENSMUST00000086830 348 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col2a1P28481 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.56□□□□□ -1.2
Col2a1P28481 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col2a1P28481 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.56□□□□□ -1.2
Col2a1P28481 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col2a1P28481 Gm15332-201ENSMUST00000118386 357 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm14054-201ENSMUST00000120744 704 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Mir1960-201ENSMUST00000157488 78 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm23386-201ENSMUST00000158585 144 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm17048-201ENSMUST00000179266 847 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm20926-201ENSMUST00000194457 696 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm18103-201ENSMUST00000216621 779 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col2a1P28481 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.55□□□□□ -1.2
Col2a1P28481 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.55□□□□□ -1.2
Col2a1P28481 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col2a1P28481 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.55□□□□□ -1.2
Col2a1P28481 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Col2a1P28481 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm13430-201ENSMUST00000121366 288 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.55□□□□□ -1.2
Col2a1P28481 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Mir7072-201ENSMUST00000184542 60 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm8506-201ENSMUST00000186661 829 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm37901-201ENSMUST00000195107 514 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col2a1P28481 Gm7780-201ENSMUST00000214787 406 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.55□□□□□ -1.2
Col2a1P28481 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col2a1P28481 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC7.55□□□□□ -1.2
Col2a1P28481 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms