Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm25757-201ENSMUST00000103986 123 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm23323-201ENSMUST00000104471 133 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm12331-201ENSMUST00000119927 622 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm13622-201ENSMUST00000120658 433 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm13828-201ENSMUST00000122278 363 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 n-R5s47-201ENSMUST00000122516 119 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm8715-201ENSMUST00000162728 531 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm22408-201ENSMUST00000174925 65 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm7436-201ENSMUST00000187229 391 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm20561-201ENSMUST00000188131 292 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gm43928-201ENSMUST00000203737 409 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm33778-201ENSMUST00000216884 704 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 AC120002.1-201ENSMUST00000218456 331 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 AC117949.1-201ENSMUST00000225547 419 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Cdx1P18111 Mir455-201ENSMUST00000093594 82 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm9256-201ENSMUST00000198106 1420 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm14248-201ENSMUST00000117790 544 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm14631-201ENSMUST00000119067 594 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm5759-201ENSMUST00000119203 811 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm6884-201ENSMUST00000119318 615 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm14563-201ENSMUST00000120571 354 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm24893-201ENSMUST00000122745 369 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm24442-201ENSMUST00000157238 327 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm5787-201ENSMUST00000183049 1038 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm27596-201ENSMUST00000185061 83 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm18698-201ENSMUST00000192327 668 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm10416-201ENSMUST00000197379 645 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm9419-201ENSMUST00000200672 567 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm42673-201ENSMUST00000202676 337 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm4602-201ENSMUST00000203198 308 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 AC155834.1-201ENSMUST00000220033 498 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 AC140451.1-201ENSMUST00000227984 737 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms