Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm37648-201ENSMUST00000192072 2563 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm23440-201ENSMUST00000104299 130 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm12442-201ENSMUST00000118372 338 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm8061-201ENSMUST00000122380 350 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Snora47-201ENSMUST00000157483 138 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.81□□□□□ -1.16
Col1a1P11087 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.81□□□□□ -1.16
Col1a1P11087 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Col1a1P11087 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col1a1P11087 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm23030-201ENSMUST00000158004 273 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm29197-201ENSMUST00000185922 702 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm37187-201ENSMUST00000193425 341 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm18839-201ENSMUST00000204292 670 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 Gm45739-201ENSMUST00000213094 388 ntBASIC7.81□□□□□ -1.16
Col1a1P11087 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.81□□□□□ -1.16
Col1a1P11087 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col1a1P11087 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.8□□□□□ -1.16
Col1a1P11087 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Col1a1P11087 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm26079-201ENSMUST00000104066 133 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm13114-201ENSMUST00000117605 106 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms