Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.5□□□□□ -1.37
Hoxd3P09027 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Hoxd3P09027 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
Hoxd3P09027 AC138716.1-201ENSMUST00000226350 2959 ntBASIC6.5□□□□□ -1.37
Hoxd3P09027 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Hoxd3P09027 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.5□□□□□ -1.37
Hoxd3P09027 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Gm44257-201ENSMUST00000204469 1446 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 AC121942.3-201ENSMUST00000225768 1436 ntBASIC6.5□□□□□ -1.37
Hoxd3P09027 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm28791-201ENSMUST00000185888 1779 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm5721-201ENSMUST00000119845 1696 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm38249-201ENSMUST00000192560 2321 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 AC167192.3-201ENSMUST00000224096 1567 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm6418-201ENSMUST00000118325 3577 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Cd99l2-203ENSMUST00000114586 3459 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm13500-201ENSMUST00000119348 824 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm14229-201ENSMUST00000121178 850 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm15885-201ENSMUST00000122114 388 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm16331-201ENSMUST00000144274 498 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.49□□□□□ -1.37
Hoxd3P09027 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm25455-201ENSMUST00000157946 325 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm24315-201ENSMUST00000177835 127 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm24307-201ENSMUST00000178512 101 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm4891-201ENSMUST00000182279 912 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm8529-201ENSMUST00000183298 745 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm29175-201ENSMUST00000189500 402 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm43559-201ENSMUST00000198755 466 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm6308-201ENSMUST00000203226 313 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm8999-201ENSMUST00000204951 969 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm7482-201ENSMUST00000206446 505 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm45228-201ENSMUST00000206585 352 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm45689-201ENSMUST00000210522 133 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm45857-201ENSMUST00000212207 356 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm7570-201ENSMUST00000215246 698 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 4930525C09Rik-201ENSMUST00000217919 677 ntTSL 3 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm10120-201ENSMUST00000219845 357 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 AC132468.1-201ENSMUST00000224706 499 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Hoxd3P09027 AC166822.2-201ENSMUST00000228746 275 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm9761-201ENSMUST00000075650 492 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Snora74a-201ENSMUST00000083715 196 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms