Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Gm17076-201ENSMUST00000165185 1401 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Gm24940-201ENSMUST00000158326 108 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Gm26310-201ENSMUST00000157766 117 ntBASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Gm27018-201ENSMUST00000181136 225 ntBASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Mir7687-201ENSMUST00000184722 59 ntBASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Gm44432-201ENSMUST00000203342 938 ntBASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Gm5436-201ENSMUST00000058103 643 ntBASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 AC105958.1-201ENSMUST00000214783 2144 ntBASIC6.4□□□□□ -1.39
Col6a3E9PWQ3 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm15971-201ENSMUST00000119372 211 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm22275-201ENSMUST00000122470 310 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm45122-201ENSMUST00000206376 784 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Mir346-201ENSMUST00000083547 98 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm37962-201ENSMUST00000195535 2034 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm26098-201ENSMUST00000157247 288 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm29781-201ENSMUST00000203862 478 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm44048-201ENSMUST00000204531 361 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm18587-201ENSMUST00000213736 841 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Mir31-201ENSMUST00000083474 106 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a3E9PWQ3 Gm8692-201ENSMUST00000118102 438 ntBASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Gm7927-201ENSMUST00000118818 880 ntBASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 AC183096.1-201ENSMUST00000226392 130 ntBASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a3E9PWQ3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms