Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col4a6B1AVK5 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col4a6B1AVK5 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Col4a6B1AVK5 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Mir700-201ENSMUST00000102169 79 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm13114-201ENSMUST00000117605 106 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm12901-201ENSMUST00000118690 532 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm14300-201ENSMUST00000120800 946 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Snora47-201ENSMUST00000157483 138 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm29357-201ENSMUST00000186877 698 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm17918-201ENSMUST00000205315 574 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm4510-201ENSMUST00000218265 427 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Col4a6B1AVK5 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm16074-201ENSMUST00000119524 444 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm11848-201ENSMUST00000121207 973 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm18833-201ENSMUST00000173218 862 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm27355-201ENSMUST00000185045 128 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm44312-201ENSMUST00000203536 469 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm44833-201ENSMUST00000208368 331 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Gm7802-201ENSMUST00000216464 262 ntBASIC6.84□□□□□ -1.32
Col4a6B1AVK5 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col4a6B1AVK5 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm39041-201ENSMUST00000205557 3902 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms