Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm22262-201ENSMUST00000158713 86 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Mir5107-201ENSMUST00000175586 88 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm5708-201ENSMUST00000196289 886 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a4A2AX52 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.65□□□□□ -1.5
Col6a4A2AX52 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm8256-203ENSMUST00000228692 591 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm10205-201ENSMUST00000087431 234 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm19031-201ENSMUST00000176280 1365 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm13400-201ENSMUST00000117436 380 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm13983-201ENSMUST00000118018 865 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm12901-201ENSMUST00000118690 532 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm23884-201ENSMUST00000122687 294 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm27005-201ENSMUST00000182783 921 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm37463-201ENSMUST00000193819 796 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Gm37121-201ENSMUST00000192219 2556 ntBASIC5.65□□□□□ -1.51
Col6a4A2AX52 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.65□□□□□ -1.51
Col6a4A2AX52 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm13835-201ENSMUST00000118459 685 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm13991-201ENSMUST00000120190 648 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm24179-201ENSMUST00000158925 127 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm16139-201ENSMUST00000160015 420 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm44471-201ENSMUST00000197963 100 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm36501-201ENSMUST00000221857 745 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm35619-201ENSMUST00000222548 600 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 AV026068-216ENSMUST00000223874 328 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 AV026068-218ENSMUST00000223980 575 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm14529-201ENSMUST00000117894 406 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm13702-201ENSMUST00000118542 825 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm25717-201ENSMUST00000158631 353 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm8930-201ENSMUST00000201693 768 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms