Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2aQ9DB34 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm23748-201ENSMUST00000104227 131 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm15311-201ENSMUST00000119682 282 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm15305-201ENSMUST00000120354 288 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm12540-201ENSMUST00000121938 319 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm14613-201ENSMUST00000122239 752 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm12778-201ENSMUST00000122341 333 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm23031-201ENSMUST00000157998 119 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm10136-201ENSMUST00000183196 435 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm8479-201ENSMUST00000203825 718 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm43867-201ENSMUST00000203860 525 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm24621-201ENSMUST00000082679 140 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Chmp2aQ9DB34 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Mir708-201ENSMUST00000102189 109 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm16073-201ENSMUST00000116032 517 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm5601-201ENSMUST00000118909 972 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm5166-201ENSMUST00000121332 573 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm23756-201ENSMUST00000157582 114 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm25989-201ENSMUST00000158761 133 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm6264-201ENSMUST00000160802 624 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm16297-201ENSMUST00000161466 459 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm28846-201ENSMUST00000189161 368 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm17895-201ENSMUST00000194028 874 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm5711-201ENSMUST00000197896 421 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm9367-201ENSMUST00000205703 546 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm30646-201ENSMUST00000207662 180 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm32983-201ENSMUST00000208500 505 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.94□□□□□ -1.3
Chmp2aQ9DB34 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms