Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm7412-201ENSMUST00000191692 605 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm36928-201ENSMUST00000192466 694 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm37325-201ENSMUST00000194971 694 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm43048-201ENSMUST00000196101 388 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm44374-201ENSMUST00000199821 140 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm17995-201ENSMUST00000209266 530 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm5339-201ENSMUST00000210551 1102 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 CT009733.1-202ENSMUST00000224941 441 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 AC105958.1-201ENSMUST00000214783 2144 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nkx6-1Q99MA9 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 AC159379.2-201ENSMUST00000220244 2482 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Igkv11-106-201ENSMUST00000103331 346 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm22781-201ENSMUST00000104083 137 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm11858-201ENSMUST00000117935 838 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm14610-201ENSMUST00000118358 966 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm4773-201ENSMUST00000120392 702 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm8722-201ENSMUST00000121466 769 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm15644-201ENSMUST00000121764 387 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm16113-201ENSMUST00000159629 372 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Mir3473g-201ENSMUST00000183494 136 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Mir6911-201ENSMUST00000184241 69 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm29525-201ENSMUST00000189844 699 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm29523-201ENSMUST00000191415 699 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm37884-201ENSMUST00000191857 818 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm7341-201ENSMUST00000192183 926 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm6680-201ENSMUST00000192789 950 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm18843-201ENSMUST00000194982 719 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm42708-201ENSMUST00000196332 905 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm43546-201ENSMUST00000196721 943 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.03□□□□□ -1.28
Nkx6-1Q99MA9 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms