Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm5611-201ENSMUST00000164523 852 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm17149-201ENSMUST00000164712 375 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm18430-201ENSMUST00000197534 682 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm43212-201ENSMUST00000198208 394 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm43141-201ENSMUST00000199695 274 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm43459-201ENSMUST00000202093 331 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm44565-201ENSMUST00000208194 269 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm19340-201ENSMUST00000221995 345 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 A1cf-203ENSMUST00000224400 1204 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.99□□□□□ -1.45
Scrt1Q99M85 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Scrt1Q99M85 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 AC093022.3-201ENSMUST00000226569 1926 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm14865-201ENSMUST00000117523 494 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm5752-201ENSMUST00000117771 594 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm15181-201ENSMUST00000120142 177 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm12152-201ENSMUST00000122465 684 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm5970-201ENSMUST00000131638 1216 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm24228-201ENSMUST00000158829 129 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm17137-202ENSMUST00000165729 957 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm28958-201ENSMUST00000185864 703 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm8241-201ENSMUST00000189286 816 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm37349-201ENSMUST00000194205 624 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm45497-201ENSMUST00000211701 740 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.98□□□□□ -1.45
Scrt1Q99M85 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms