Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm37864-201ENSMUST00000195308 3075 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm24195-201ENSMUST00000116804 137 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm5387-201ENSMUST00000119776 857 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm6838-201ENSMUST00000172851 582 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm26736-201ENSMUST00000180425 1236 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm29562-201ENSMUST00000190113 904 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm37469-201ENSMUST00000193728 890 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm18207-201ENSMUST00000205486 526 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm44943-201ENSMUST00000207254 300 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm45343-201ENSMUST00000210452 828 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 AC153961.1-201ENSMUST00000217760 385 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm24071-201ENSMUST00000104520 132 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm12727-201ENSMUST00000119885 359 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm14749-201ENSMUST00000121269 333 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm15730-201ENSMUST00000121828 415 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm8860-201ENSMUST00000193160 445 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm5307-201ENSMUST00000204772 760 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm45756-201ENSMUST00000212491 407 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm18940-201ENSMUST00000222518 871 ntBASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc9Q8VC31 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm43611-201ENSMUST00000196656 4352 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm26014-201ENSMUST00000104405 132 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm6620-201ENSMUST00000120113 715 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm25845-201ENSMUST00000122588 310 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm22235-201ENSMUST00000157085 110 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm23117-201ENSMUST00000158482 108 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 Gm7426-201ENSMUST00000179046 404 ntBASIC8.04□□□□□ -1.12
Ccdc9Q8VC31 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms