Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Rnu11-201ENSMUST00000104135 134 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm7058-201ENSMUST00000119209 902 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm5793-201ENSMUST00000119393 630 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm9064-201ENSMUST00000163579 566 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm17366-201ENSMUST00000167629 187 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm19840-201ENSMUST00000169624 882 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Mir7674-201ENSMUST00000184964 63 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm21524-201ENSMUST00000190499 696 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm21715-201ENSMUST00000191056 694 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm13224-201ENSMUST00000119586 94 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm25459-201ENSMUST00000157953 114 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm21301-201ENSMUST00000189476 699 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm36939-201ENSMUST00000194889 439 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm4997-201ENSMUST00000154056 360 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm22194-201ENSMUST00000116869 95 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms