Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 n-R5s196-201ENSMUST00000083136 117 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Olfr654-201ENSMUST00000098173 1155 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm37661-201ENSMUST00000191863 1550 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm44624-201ENSMUST00000208700 2278 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm37630-201ENSMUST00000194210 1456 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm23834-201ENSMUST00000104436 129 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm15110-201ENSMUST00000117545 881 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm11474-201ENSMUST00000120814 277 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm11188-201ENSMUST00000122382 388 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm27219-201ENSMUST00000184633 742 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm29562-201ENSMUST00000190113 904 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm37550-201ENSMUST00000193230 463 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm37869-201ENSMUST00000193385 595 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm43542-201ENSMUST00000199505 379 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 CT954323.2-201ENSMUST00000222056 213 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm25852-201ENSMUST00000082790 130 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 AC122357.1-201ENSMUST00000221652 1515 ntBASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Trim47Q8C0E3 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 AC154323.3-201ENSMUST00000226927 1660 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms