Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Ggps1-201ENSMUST00000170957 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm42575-201ENSMUST00000202942 1674 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 4931428F04Rik-205ENSMUST00000212922 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Sbk3-202ENSMUST00000144863 3152 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Prdm2-201ENSMUST00000105778 7304 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm15076-201ENSMUST00000117076 474 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm13527-201ENSMUST00000117926 691 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm13975-201ENSMUST00000119253 782 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm12768-201ENSMUST00000120055 759 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm15986-201ENSMUST00000122153 400 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm23501-201ENSMUST00000157744 256 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm26483-201ENSMUST00000158016 104 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Chn2-215ENSMUST00000204921 861 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm45506-201ENSMUST00000211620 280 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 AC153363.1-201ENSMUST00000213572 359 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm2099-201ENSMUST00000220979 412 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC9.51□□□□□ -0.89
Trim35Q8C006 CT030170.6-202ENSMUST00000223186 544 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 AC153153.1-201ENSMUST00000225803 793 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 AC163664.2-201ENSMUST00000228894 459 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Sp3-201ENSMUST00000066003 3808 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm26072-201ENSMUST00000083135 107 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm16477-201ENSMUST00000085365 801 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm6558-201ENSMUST00000191934 1973 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Parvb-201ENSMUST00000023072 3784 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm7790-201ENSMUST00000118716 1310 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm15088-201ENSMUST00000117973 1508 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm15098-201ENSMUST00000119036 1508 ntBASIC9.51□□□□□ -0.89
Trim35Q8C006 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim35Q8C006 Klf8-201ENSMUST00000039545 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Gm20744-201ENSMUST00000208972 2626 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim35Q8C006 Ctss-202ENSMUST00000116304 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 Gemin8-204ENSMUST00000130880 1389 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 AC090962.1-201ENSMUST00000226066 1799 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Olfr6-202ENSMUST00000213552 4349 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 Lrrfip1-203ENSMUST00000097649 3645 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm13286-201ENSMUST00000117750 537 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm15041-201ENSMUST00000119048 756 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm12362-201ENSMUST00000121986 342 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm13685-201ENSMUST00000122462 141 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm22389-201ENSMUST00000158193 301 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm17086-201ENSMUST00000171346 484 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Cdk2ap2-203ENSMUST00000174149 386 ntTSL 2 BASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm22308-201ENSMUST00000177609 107 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm25194-201ENSMUST00000177987 79 ntBASIC9.5□□□□□ -0.89
Trim35Q8C006 Gm25873-201ENSMUST00000180317 107 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms