Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm4927-201ENSMUST00000219548 1318 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm37107-201ENSMUST00000195326 2552 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm12369-201ENSMUST00000121343 942 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm15006-201ENSMUST00000121419 1122 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm13669-201ENSMUST00000122366 457 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm26037-201ENSMUST00000158150 311 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm9529-201ENSMUST00000177598 579 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm27602-201ENSMUST00000183861 111 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm9517-201ENSMUST00000195021 874 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm18112-201ENSMUST00000219862 1195 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm6436-201ENSMUST00000077163 451 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.4□□□□□ -0.9
Usp47Q8BY87 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp47Q8BY87 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Usp47Q8BY87 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usp47Q8BY87 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Usp47Q8BY87 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usp47Q8BY87 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Usp47Q8BY87 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Usp47Q8BY87 Gm4806-201ENSMUST00000222704 1690 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm11799-201ENSMUST00000116110 460 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm14772-201ENSMUST00000116562 514 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm14300-201ENSMUST00000120800 946 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm12630-201ENSMUST00000121575 784 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm12451-201ENSMUST00000121636 633 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm27970-201ENSMUST00000184854 407 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm24695-201ENSMUST00000083877 83 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm38277-201ENSMUST00000195172 1367 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 AC153152.1-201ENSMUST00000221105 2742 ntBASIC9.39□□□□□ -0.91
Usp47Q8BY87 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp47Q8BY87 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp47Q8BY87 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Gm24888-201ENSMUST00000104387 130 ntBASIC9.38□□□□□ -0.91
Usp47Q8BY87 Gm11107-201ENSMUST00000165414 505 ntBASIC9.38□□□□□ -0.91
Usp47Q8BY87 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Gm9274-201ENSMUST00000182505 984 ntBASIC9.38□□□□□ -0.91
Usp47Q8BY87 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp47Q8BY87 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms