Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm23022-201ENSMUST00000158768 180 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm17973-201ENSMUST00000174509 520 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm5445-201ENSMUST00000180224 480 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm18181-201ENSMUST00000190670 736 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm18428-201ENSMUST00000194986 791 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm42424-201ENSMUST00000198319 376 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm45319-201ENSMUST00000210220 318 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 CT573422.1-201ENSMUST00000216655 405 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm19007-201ENSMUST00000217746 874 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Pcdh19Q80TF3 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Pcdh19Q80TF3 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 AC155298.3-201ENSMUST00000225307 3220 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm23323-201ENSMUST00000104471 133 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm15715-201ENSMUST00000118032 283 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm15916-201ENSMUST00000118355 736 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm11926-201ENSMUST00000118520 430 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm15385-201ENSMUST00000118725 667 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm22555-201ENSMUST00000157801 62 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm27401-201ENSMUST00000184052 173 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Mir7005-201ENSMUST00000185089 69 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm2617-201ENSMUST00000185690 1066 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm29525-201ENSMUST00000189844 699 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm28266-201ENSMUST00000191410 439 ntBASIC7.46□□□□□ -1.22
Pcdh19Q80TF3 Gm29523-201ENSMUST00000191415 699 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 172.5 ms