Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm14550-201ENSMUST00000117918 407 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm12135-201ENSMUST00000119170 466 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm13222-201ENSMUST00000119638 138 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm5166-201ENSMUST00000121332 573 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm14353-201ENSMUST00000122200 869 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm28846-201ENSMUST00000189161 368 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm37871-201ENSMUST00000194973 688 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm34144-201ENSMUST00000197039 259 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm4860-201ENSMUST00000200368 454 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm21054-201ENSMUST00000203981 380 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm18012-201ENSMUST00000204558 773 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm35619-201ENSMUST00000222548 600 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Upf3bQ3ULL6 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm25093-201ENSMUST00000103993 132 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm13265-201ENSMUST00000118090 421 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm11553-201ENSMUST00000120682 240 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm7746-201ENSMUST00000120966 503 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm23888-201ENSMUST00000122690 253 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm20691-201ENSMUST00000176889 333 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms