Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.14□□□□□ -1.43
Scn1bP97952 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn1bP97952 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.14□□□□□ -1.43
Scn1bP97952 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.14□□□□□ -1.43
Scn1bP97952 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1bP97952 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1bP97952 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1bP97952 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm23323-201ENSMUST00000104471 133 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm6491-201ENSMUST00000118273 990 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm11320-201ENSMUST00000119434 463 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm11850-201ENSMUST00000119679 479 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm24139-201ENSMUST00000122780 288 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm17217-201ENSMUST00000166613 469 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm23162-201ENSMUST00000175081 121 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1bP97952 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm43044-201ENSMUST00000198091 379 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm43382-201ENSMUST00000198954 838 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm30196-201ENSMUST00000208957 160 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm45756-201ENSMUST00000212491 407 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.13□□□□□ -1.43
Scn1bP97952 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1bP97952 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm33312-201ENSMUST00000222443 332 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.13□□□□□ -1.43
Scn1bP97952 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm28392-201ENSMUST00000077630 393 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm7493-201ENSMUST00000085919 626 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1bP97952 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Scn1bP97952 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms