Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29212-201ENSMUST00000190384 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29533-201ENSMUST00000190403 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28162-201ENSMUST00000190545 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29030-201ENSMUST00000190848 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28742-201ENSMUST00000191001 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28899-201ENSMUST00000191161 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29567-201ENSMUST00000191188 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28222-201ENSMUST00000191210 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28776-201ENSMUST00000191282 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm29306-201ENSMUST00000191366 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29618-201ENSMUST00000191423 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28136-210ENSMUST00000191432 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29251-201ENSMUST00000191480 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28658-201ENSMUST00000191532 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm32180-201ENSMUST00000192415 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm30598-201ENSMUST00000192620 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm7115-201ENSMUST00000193706 832 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm37627-201ENSMUST00000194585 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm34274-201ENSMUST00000195825 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm43848-201ENSMUST00000198060 1247 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm18635-201ENSMUST00000199020 1060 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm2860-201ENSMUST00000199226 707 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm43367-201ENSMUST00000199986 625 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.66□□□□□ -1.18
Sox1P53783 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.66□□□□□ -1.18
Sox1P53783 AC122937.1-201ENSMUST00000226405 793 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Sox1P53783 Olfr683-201ENSMUST00000061284 960 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Sox1P53783 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm22578-201ENSMUST00000083730 107 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC7.66□□□□□ -1.18
Sox1P53783 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.66□□□□□ -1.18
Sox1P53783 AC093043.2-201ENSMUST00000228616 2017 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Sox1P53783 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm43776-201ENSMUST00000199729 2914 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 Gm26340-201ENSMUST00000102365 99 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Sox1P53783 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Sox1P53783 Gm15185-201ENSMUST00000117397 746 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 Gm12573-201ENSMUST00000118158 286 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm13229-201ENSMUST00000118238 340 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm13772-201ENSMUST00000118431 317 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm9439-201ENSMUST00000119554 973 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm11990-201ENSMUST00000121505 897 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm12834-201ENSMUST00000121855 2829 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.65□□□□□ -1.18
Sox1P53783 Gm22636-201ENSMUST00000158142 275 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm24211-201ENSMUST00000158264 107 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm24773-201ENSMUST00000158513 99 ntBASIC7.65□□□□□ -1.18
Sox1P53783 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm23799-201ENSMUST00000175559 120 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Zfp950-206ENSMUST00000178819 171 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm29356-201ENSMUST00000186935 373 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms