Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm13114-201ENSMUST00000117605 106 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm15959-201ENSMUST00000121724 368 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm43354-201ENSMUST00000196862 346 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm44471-201ENSMUST00000197963 100 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm43215-201ENSMUST00000199108 252 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm4510-201ENSMUST00000218265 427 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm39041-201ENSMUST00000205557 3902 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm12565-201ENSMUST00000119004 649 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm14613-201ENSMUST00000122239 752 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm25178-201ENSMUST00000122633 325 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm25722-201ENSMUST00000157498 279 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm26211-201ENSMUST00000158578 129 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm25717-201ENSMUST00000158631 353 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cxcl12P40224 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Gm38352-201ENSMUST00000194459 2557 ntBASIC6.97□□□□□ -1.29
Cxcl12P40224 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Cxcl12P40224 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cxcl12P40224 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cxcl12P40224 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.96□□□□□ -1.29
Cxcl12P40224 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.96□□□□□ -1.29
Cxcl12P40224 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.96□□□□□ -1.29
Cxcl12P40224 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms